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IT PIPELINE

Hartwig Medical Foundation uses a state-of-the-art IT pipeline for bioinformatic analysis. Several tools, most of which were developed in house*, are used to call, analyze and annotate the WGS data.

All code (including all relevant documentation) used by Hartwig Medical Foundation for its IT pipeline can be accessed on Github: # Code repository with pipeline code # Code repository using Hartwig’s in-house developed tools. Please note that we cannot provide any service when installing and using this code.

Overview of the set-up and tools used in the Hartwig Medical Foundation IT pipeline (* = tool developed in house)